Transcript: ENSMUST00000235683.2 Lrrn4cl-202

Description

LRRN4 C-terminal like [Source:MGI Symbol;Acc:MGI:1916102]

Gene Synonyms

1110067I12Rik

Location

Chromosome 19: 8,828,132-8,831,174 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 10 domains and features, is associated with 581 variant alleles and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000071656.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000096257.3	Lrrn4cl-201	2583	239aa	ENSMUSP00000093976.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37909	Q3TYX2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000235683.2	Lrrn4cl-202	2420	239aa	ENSMUSP00000157980.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37909	Q3TYX2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,420 bps, Translation length: 239 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3TYX2

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37909

Version

ENSMUST00000235683.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000235683.2 Lrrn4cl-202

Summary

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Transcript: ENSMUST00000235683.2 Lrrn4cl-202

Summary

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