Transcript: ENSMUST00000233158.2 Zfp53-202

Description

zinc finger protein 53 [Source:MGI Symbol;Acc:MGI:99200]

Gene Synonyms

D030067O06Rik, KRAZ1, Zfp-53, Zfp118, zfas8

Location

Chromosome 17: 21,709,260-21,730,735 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 92 domains and features, is associated with 1431 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000057409.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000233158.2	Zfp53-202	3065	652aa	ENSMUSP00000156751.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28440	Q9Z117	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000076664.7	Zfp53-201	2058	652aa	ENSMUSP00000075960.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28440	Q9Z117	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 3,065 bps, Translation length: 652 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28440

Version

ENSMUST00000233158.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000233158.2 Zfp53-202

Summary

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Transcript: ENSMUST00000233158.2 Zfp53-202

Summary

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