Transcript: ENSMUST00000224208.2 Adamts6-203

Description

a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 [Source:MGI Symbol;Acc:MGI:1347348]

Gene Synonyms

A930019D11Rik, ADAM-TS6, b2b1879.1Clo, b2b2029Clo, b2b2182Clo, b2b2187.1Clo, b2b2228Clo

Location

Chromosome 13: 104,430,998-104,633,100 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 44 domains and features, is associated with 8275 variant alleles and maps to 247 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000046169.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000224208.2	Adamts6-203	6480	1117aa	ENSMUSP00000153359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36773	D3Z1A5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000065766.7	Adamts6-201	4822	1117aa	ENSMUSP00000064570.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36773	D3Z1A5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000224784.2	Adamts6-207	7690	468aa	ENSMUSP00000153665.2	Nonsense mediated decay		A0A286YEC9	-
ENSMUST00000224742.2	Adamts6-206	4901	292aa	ENSMUSP00000152936.2	Nonsense mediated decay		A0A286YCD8	-
ENSMUST00000224303.2	Adamts6-204	4672	292aa	ENSMUSP00000153431.2	Nonsense mediated decay		A0A286YCD8	-
ENSMUST00000223562.2	Adamts6-202	3840	468aa	ENSMUSP00000153504.2	Nonsense mediated decay		A0A286YEC9	-
ENSMUST00000224504.2	Adamts6-205	745	96aa	ENSMUSP00000153194.2	Nonsense mediated decay		A0A286YCZ1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 6,480 bps, Translation length: 1,117 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36773

Version

ENSMUST00000224208.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000224208.2 Adamts6-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000224208.2 Adamts6-203

Summary

About Us

Get help

Our sister sites

Follow us