Transcript: ENSMUST00000206455.2 Chrna2-202

Description

cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal) [Source:MGI Symbol;Acc:MGI:87886]

Gene Synonyms

Acra-2, Acra2

Location

Chromosome 14: 66,372,488-66,388,616 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 29 domains and features, is associated with 1370 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022041.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022620.11	Chrna2-201	3554	512aa	ENSMUSP00000022620.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27219	Q91X60	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000206455.2	Chrna2-202	1933	512aa	ENSMUSP00000145896.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27219	Q91X60	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,933 bps, Translation length: 512 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91X60

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27219

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000206455.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000206455.2 Chrna2-202

Summary

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Transcript: ENSMUST00000206455.2 Chrna2-202

Summary

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