Transcript: ENSMUST00000195797.2 D13Ertd608e-202

Description

DNA segment, Chr 13, ERATO Doi 608, expressed [Source:MGI Symbol;Acc:MGI:1277199]

Location

Chromosome 13: 120,306,884-120,308,106 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 7 domains and features, is associated with 397 variant alleles and maps to 134 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000095514.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000195797.2	D13Ertd608e-202	704	151aa	ENSMUSP00000142107.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3UPR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000179131.2	D13Ertd608e-201	417	139aa	ENSMUSP00000136381.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QMN9	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 704 bps, Translation length: 151 residues

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000195797.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000195797.2 D13Ertd608e-202

Summary

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Transcript: ENSMUST00000195797.2 D13Ertd608e-202

Summary

About Us

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