Transcript: ENSMUST00000171906.2 Gm3667-201

Description

predicted gene 3667 [Source:MGI Symbol;Acc:MGI:3781843]

Location

Chromosome 14: 15,579,811-15,601,271 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 928 variant alleles and maps to 1610 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000090691.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000171906.2	Gm3667-201	2053	205aa	ENSMUSP00000133107.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7N757	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000249452.1	Gm3667-202	1715	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-
ENSMUST00000249454.1	Gm3667-204	813	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-
ENSMUST00000249453.1	Gm3667-203	653	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,053 bps, Translation length: 205 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000171906.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000171906.2 Gm3667-201

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Transcript: ENSMUST00000171906.2 Gm3667-201

Summary

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