Transcript: ENSMUST00000169652.3 Tifab-201

Description

TRAF-interacting protein with forkhead-associated domain, family member B [Source:MGI Symbol;Acc:MGI:2385852]

Location

Chromosome 13: 56,321,517-56,326,614 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 864 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000049625.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000169652.3	Tifab-201	3349	147aa	ENSMUSP00000131162.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26558	Q8JZM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225063.2	Tifab-202	2718	147aa	ENSMUSP00000152976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26558	Q8JZM6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 3,349 bps, Translation length: 147 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8JZM6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26558

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000169652.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000169652.3 Tifab-201

Summary

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Transcript: ENSMUST00000169652.3 Tifab-201

Summary

About Us

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