Transcript: ENSMUST00000145985.3 9430021M05Rik-201

Description

RIKEN cDNA 9430021M05 gene [Source:MGI Symbol;Acc:MGI:1924538]

Location

About this transcript

This transcript has 3 exons, is associated with 882 variant alleles and maps to 93 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000246903.1	9430021M05Rik-204	2010	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000247521.1	9430021M05Rik-206	1691	No protein	-	lncRNA	-
ENSMUST00000145985.3	9430021M05Rik-201	1228	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000241442.1	9430021M05Rik-203	1179	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000240841.1	9430021M05Rik-202	1094	No protein	-	lncRNA	-
ENSMUST00000247333.1	9430021M05Rik-205	1064	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,228 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000145985.3

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.