Transcript: ENSMUST00000126189.3 Msantd5-202

Description

Myb/SANT DNA binding domain containing 5 [Source:MGI Symbol;Acc:MGI:3650740]

Gene Synonyms

Gm12569

Location

Chromosome 11: 51,111,300-51,125,880 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 1128 variant alleles and maps to 55 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000061469.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000126189.3	Msantd5-202	1462	225aa	ENSMUSP00000155969.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P6G8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000074198.2	Msantd5-201	489	163aa	ENSMUSP00000156300.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P7A2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,462 bps, Translation length: 225 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000126189.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000126189.3 Msantd5-202

Summary

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Transcript: ENSMUST00000126189.3 Msantd5-202

Summary

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