Mouse (GRCm39)
Description

shroom family member 3 [Source:MGI Symbol;Acc:MGI:1351655]

Gene Synonyms

D5Ertd287e, Shrm, Shrm3

Location
About this transcript

This transcript has 11 exons, is annotated with 56 domains and features, is associated with 17730 variant alleles and maps to 493 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000113055.9Shroom3-20367651980aaENSMUSP00000108678.3
 
Protein coding
CCDS39154E9QMY5 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000113051.9Shroom3-20164351805aaENSMUSP00000108674.3
 
Protein coding
CCDS39155A0A0R4J1H8 GENCODE basicTSL:1
ENSMUST00000113054.9Shroom3-20264011805aaENSMUSP00000108677.3
 
Protein coding
CCDS39155A0A0R4J1H8 GENCODE basicTSL:1
ENSMUST00000225438.2Shroom3-21157421899aaENSMUSP00000153516.2
 
Protein coding
A0A286YDQ8 GENCODE basic
ENSMUST00000168878.8Shroom3-20456301849aaENSMUSP00000130419.2
 
Protein coding
E9Q6I3 GENCODE basicTSL:1
ENSMUST00000172706.2Shroom3-205687179aaENSMUSP00000133690.2
 
Protein coding
G3UXH3 TSL:2CDS 3' incomplete
ENSMUST00000202767.2Shroom3-2103307No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000172849.2Shroom3-207271No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000201800.2Shroom3-2093611No protein-
 
Retained intron
-TSL:NA
ENSMUST00000172752.2Shroom3-2061027No protein-
 
Retained intron
-TSL:1
ENSMUST00000200869.2Shroom3-208911No protein-
 
Retained intron
-TSL:NA
Statistics

Exons: 11, Coding exons: 11, Transcript length: 6,765 bps, Translation length: 1,980 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39154

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000113055.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.