Mouse (GRCm39)
Description

sphingomyelin synthase 1 [Source:MGI Symbol;Acc:MGI:2444110]

Gene Synonyms

9530058O11Rik, SMS1, SMS1alpha1, SMS1alpha2, SMS1beta, SMS1gamma, Tmem23

Location
About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 11378 variant alleles and maps to 310 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000142618.8Sgms1-2094036419aaENSMUSP00000117336.2
 
Protein coding
CCDS29750Q8VCQ6 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000099514.10Sgms1-2013665419aaENSMUSP00000097114.4
 
Protein coding
CCDS29750Q8VCQ6 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000151289.9Sgms1-2123262419aaENSMUSP00000123395.2
 
Protein coding
CCDS29750Q8VCQ6 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000151822.2Sgms1-21342734aaENSMUSP00000114683.2
 
Protein coding
D3YV54 TSL:3CDS 3' incomplete
ENSMUST00000236410.2Sgms1-2152593293aaENSMUSP00000157976.2
 
Nonsense mediated decay
A0A494BA77 -
ENSMUST00000152340.8Sgms1-2141986217aaENSMUSP00000119869.2
 
Nonsense mediated decay
Q8VCQ6-3 TSL:2
ENSMUST00000134415.2Sgms1-2061595220aaENSMUSP00000115785.2
 
Nonsense mediated decay
E3W996 TSL:5
ENSMUST00000141655.8Sgms1-208603No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000149934.2Sgms1-211483No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000149107.8Sgms1-210358No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000131768.8Sgms1-205353No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000124483.2Sgms1-2033086No protein-
 
Retained intron
-TSL:2
ENSMUST00000124012.8Sgms1-2022566No protein-
 
Retained intron
-TSL:2
ENSMUST00000141252.2Sgms1-207676No protein-
 
Retained intron
-TSL:2
ENSMUST00000126332.2Sgms1-204357No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 10, Coding exons: 5, Transcript length: 3,665 bps, Translation length: 419 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VCQ6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29750

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000099514.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.