Mouse (GRCm39)
Description

YJU2 splicing factor homolog B [Source:MGI Symbol;Acc:MGI:1914986]

Gene Synonyms

4930527D15Rik, Ccdc130

Location
About this transcript

This transcript has 10 exons, is annotated with 13 domains and features, is associated with 1066 variant alleles and maps to 250 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000098578.10Yju2b-2022119385aaENSMUSP00000096177.4
 
Protein coding
CCDS40409Q9D516 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000005120.12Yju2b-2011441198aaENSMUSP00000005120.6
 
Protein coding
CCDS80906Q9D516-2 GENCODE basicTSL:5
ENSMUST00000163993.2Yju2b-20330714aaENSMUSP00000125894.2
 
Protein coding
E9Q5P3 TSL:5CDS 3' incomplete
ENSMUST00000172320.2Yju2b-20773669aaENSMUSP00000128605.2
 
Nonsense mediated decay
E9Q971 TSL:5
ENSMUST00000164476.8Yju2b-2041247No protein-
 
Retained intron
-TSL:1
ENSMUST00000166285.2Yju2b-205696No protein-
 
Retained intron
-TSL:3
ENSMUST00000166728.2Yju2b-206447No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,119 bps, Translation length: 385 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D516

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40409

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000098578.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.