Mouse (GRCm39)
Description

calaxin [Source:MGI Symbol;Acc:MGI:1914043]

Gene Synonyms

4930449A16Rik, 5430404L10Rik, Efcab1

Location
About this transcript

This transcript has 6 exons, is annotated with 21 domains and features, is associated with 1317 variant alleles and maps to 240 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000090277.3Clxn-2012752212aaENSMUSP00000087744.2
 
Protein coding
CCDS27975Q9D3N2 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000229825.2Clxn-2041511107aaENSMUSP00000155853.2
 
Nonsense mediated decay
Q9D3N2-4 -
ENSMUST00000229121.2Clxn-2031430195aaENSMUSP00000155692.2
 
Nonsense mediated decay
Q9D3N2-2 -
ENSMUST00000228998.2Clxn-2021048169aaENSMUSP00000155377.2
 
Nonsense mediated decay
Q9D3N2-3 -
Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,752 bps, Translation length: 212 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D3N2

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27975

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000090277.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.