Transcript: ENSMUST00000089883.7 Masp1-201

Description

mannan-binding lectin serine peptidase 1 [Source:MGI Symbol;Acc:MGI:88492]

Gene Synonyms

Crarf

Location

Chromosome 16: 23,268,167-23,339,565 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 46 domains and features, is associated with 3692 variant alleles and maps to 273 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022887.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000229619.2	Masp1-203	3786	733aa	ENSMUSP00000155665.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P98064-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000089883.7	Masp1-201	5345	704aa	ENSMUSP00000087327.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37303	P98064	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000230040.2	Masp1-204	2035	385aa	ENSMUSP00000155343.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHR3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000229152.2	Masp1-202	2093	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 5,345 bps, Translation length: 704 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P98064

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37303

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000089883.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000089883.7 Masp1-201

Summary

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Transcript: ENSMUST00000089883.7 Masp1-201

Summary

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