Transcript: ENSMUST00000089230.7 Ppp2r2a-201

Description

protein phosphatase 2, regulatory subunit B, alpha [Source:MGI Symbol;Acc:MGI:1919228]

Gene Synonyms

2410004D02Rik

Location

Chromosome 14: 67,251,505-67,309,893 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 26 domains and features, is associated with 3071 variant alleles and maps to 401 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022052.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000089230.7	Ppp2r2a-201	4010	447aa	ENSMUSP00000086640.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56967	Q3TT94 Q6P1F6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225380.2	Ppp2r2a-204	1988	367aa	ENSMUSP00000153191.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9CWU3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000225251.2	Ppp2r2a-203	2192	50aa	ENSMUSP00000153452.2	Nonsense mediated decay		A0A286YDJ9	-
ENSMUST00000225469.2	Ppp2r2a-205	770	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000223630.2	Ppp2r2a-202	1845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,010 bps, Translation length: 447 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P1F6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS56967

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000089230.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000089230.7 Ppp2r2a-201

Summary

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Transcript: ENSMUST00000089230.7 Ppp2r2a-201

Summary

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