Mouse (GRCm39)
Description

PDZ domain containing RING finger 3 [Source:MGI Symbol;Acc:MGI:1933157]

Gene Synonyms

1110020C07Rik, LNX3, Semcap3, semaphorin cytoplasmic domain-associated protein 3A

About this transcript

This transcript has 10 exons, is annotated with 33 domains and features, is associated with 12738 variant alleles and maps to 195 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000075994.11Pdzrn3-20141041063aaENSMUSP00000075376.7
 
Protein coding
CCDS20392Q69ZS0 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000239140.2Pdzrn3-2051808504aaENSMUSP00000158931.2
 
Protein coding
A0A5F8MPS6 CDS 3' incomplete
ENSMUST00000124884.4Pdzrn3-202666No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000151175.3Pdzrn3-204621No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000144505.2Pdzrn3-2032969No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,104 bps, Translation length: 1,063 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q69ZS0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20392

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000075994.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.