Transcript: ENSMUST00000073337.8 Cramp1-201

Description

cramped chromatin regulator 1 [Source:MGI Symbol;Acc:MGI:1930190]

Gene Synonyms

5830477H08Rik, Cramp1l, Tce4

Location

Chromosome 17: 25,180,200-25,234,204 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 36 domains and features, is associated with 2462 variant alleles and maps to 399 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000038002.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000233774.2	Cramp1-203	7674	1285aa	ENSMUSP00000156906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50030	Q6PG95	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000073337.8	Cramp1-201	7519	1285aa	ENSMUSP00000073060.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50030	Q6PG95	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000233169.2	Cramp1-202	694	113aa	ENSMUSP00000156431.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2W7C5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 7,519 bps, Translation length: 1,285 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PG95

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50030

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000073337.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000073337.8 Cramp1-201

Summary

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Transcript: ENSMUST00000073337.8 Cramp1-201

Summary

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