Transcript: ENSMUST00000069597.8 Csnk1g3-201

Description

casein kinase 1, gamma 3 [Source:MGI Symbol;Acc:MGI:1917675]

Gene Synonyms

3300002K07Rik, C330049O21Rik

Location

Chromosome 18: 53,995,194-54,088,620 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 3878 variant alleles and maps to 292 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000073563.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000237880.2	Csnk1g3-203	2180	448aa	ENSMUSP00000158175.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BAP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000069597.8	Csnk1g3-201	4249	424aa	ENSMUSP00000070259.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37823	Q8C4X2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000236399.2	Csnk1g3-202	422	140aa	ENSMUSP00000158167.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BAN5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 4,249 bps, Translation length: 424 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C4X2

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37823

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000069597.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000069597.8 Csnk1g3-201

Summary

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Transcript: ENSMUST00000069597.8 Csnk1g3-201

Summary

About Us

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