Transcript: ENSMUST00000063918.4 Sp8-201

Description

trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]

Gene Synonyms

D930049B17Rik, mBtd

Location

Chromosome 12: 118,810,064-118,816,311 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 34 domains and features, is associated with 557 variant alleles and maps to 146 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000048562.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000063918.4	Sp8-201	4478	486aa	ENSMUSP00000065746.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26213	Q5QR90 Q8BMJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000223305.2	Sp8-202	726	181aa	ENSMUSP00000152523.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1Y7VJL2	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 4,478 bps, Translation length: 486 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BMJ8

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26213

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000063918.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000063918.4 Sp8-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000063918.4 Sp8-201

Summary

About Us

Get help

Our sister sites

Follow us