Transcript: ENSMUST00000060223.4 Ptgr3-201

Description

prostaglandin reductase 3 [Source:MGI Symbol;Acc:MGI:2444835]

Gene Synonyms

C530046K17Rik, Pthr3, Zadh2

Location

Chromosome 18: 84,106,188-84,115,653 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 12 domains and features, is associated with 850 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000049090.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000060223.4	Ptgr3-201	3430	377aa	ENSMUSP00000052544.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29381	Q14AZ9 Q8BGC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000235383.2	Ptgr3-202	1789	254aa	ENSMUSP00000158299.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BB38	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 3,430 bps, Translation length: 377 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BGC4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29381

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000060223.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000060223.4 Ptgr3-201

Summary

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Transcript: ENSMUST00000060223.4 Ptgr3-201

Summary

About Us

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