Transcript: ENSMUST00000045969.8 Zfp458-201

Description

zinc finger protein 458 [Source:MGI Symbol;Acc:MGI:3040691]

Gene Synonyms

Rslcan-7

Location

Chromosome 13: 67,402,982-67,417,132 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 123 domains and features, is associated with 1064 variant alleles and maps to 100 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000055480.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000045969.8	Zfp458-201	3488	752aa	ENSMUSP00000047222.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36710	Q6P5C7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225772.2	Zfp458-204	3485	749aa	ENSMUSP00000153284.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7M6X6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000223990.2	Zfp458-202	688	205aa	ENSMUSP00000153563.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YDU6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000224648.2	Zfp458-203	4615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,488 bps, Translation length: 752 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P5C7

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36710

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000045969.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000045969.8 Zfp458-201

Summary

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Transcript: ENSMUST00000045969.8 Zfp458-201

Summary

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