Transcript: ENSMUST00000036206.14 Ccdc92-201

Description

coiled-coil domain containing 92 [Source:MGI Symbol;Acc:MGI:106485]

Gene Synonyms

D5Bwg0834e

Location

Chromosome 5: 124,911,482-124,939,488 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 1503 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000037979.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000036206.14	Ccdc92-201	2473	314aa	ENSMUSP00000038075.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19681	Q8VDN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000143268.2	Ccdc92-203	445	131aa	ENSMUSP00000114983.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YUR9	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000135495.8	Ccdc92-202	809	64aa	ENSMUSP00000119438.2	Nonsense mediated decay		D6RJ58	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,473 bps, Translation length: 314 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VDN4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19681

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000036206.14

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000036206.14 Ccdc92-201

Summary

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Transcript: ENSMUST00000036206.14 Ccdc92-201

Summary

About Us

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