Transcript: ENSMUST00000025350.10 Dcp2-201

Description

decapping mRNA 2 [Source:MGI Symbol;Acc:MGI:1917890]

Gene Synonyms

2410015D23Rik, 5730537H01Rik

Location

Chromosome 18: 44,513,594-44,558,036 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 18 domains and features, is associated with 3072 variant alleles and maps to 290 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024472.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025350.10	Dcp2-201	8616	422aa	ENSMUSP00000025350.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50275	Q9CYC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000202306.2	Dcp2-202	398	82aa	ENSMUSP00000144010.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0J9YU54	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 8,616 bps, Translation length: 422 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9CYC6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50275

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000025350.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000025350.10 Dcp2-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000025350.10 Dcp2-201

Summary

About Us

Get help

Our sister sites

Follow us