Transcript: ENSMUST00000002289.8 Uchl3-201

Description

ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:MGI Symbol;Acc:MGI:1355274]

Location

Chromosome 14: 101,891,430-101,933,561 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 12 domains and features, is associated with 2462 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022111.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000226340.2	Uchl3-202	935	265aa	ENSMUSP00000154032.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BQ39	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000002289.8	Uchl3-201	903	230aa	ENSMUSP00000002289.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27313	Q9JKB1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000228773.2	Uchl3-205	3270	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000227815.2	Uchl3-204	1270	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000226521.2	Uchl3-203	401	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 903 bps, Translation length: 230 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JKB1

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27313

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000002289.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000002289.8 Uchl3-201

Summary

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Transcript: ENSMUST00000002289.8 Uchl3-201

Summary

About Us

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