Description

immunoglobulin heavy constant mu [Source:MGI Symbol;Acc:MGI:96448]

About this transcript

This transcript has 4 exons, is associated with 9 variations and maps to 23 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Ighm-002ENSMUST000001777151698476aaENSMUSP00000136807
 
IG C gene
-A0A075B6A0 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P5

PRINCIPAL5 - APPRIS candidate principal isoform (longest coding sequence).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ighm-001ENSMUST000001034261493455aaENSMUSP00000100222
 
IG C gene
-A0A075B5P6 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 4 Coding exons: 4 Transcript length: 1,493 bps Translation length: 455 residues

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENSMUST00000103426.2

Type

Known IG C gene

Annotation Method

Immunoglobulin (Ig) and T-cell receptor (TcR) annotation from Ensembl and Havana. Havana annotation was imported from the Havana project's manually curated IG gene set. Ensembl annotation was imported from the IMGT database using Exonerate. Click here for more details about the Ensembl annotation.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays