Description

melanocortin 1 receptor [Source:MGI Symbol;Acc:MGI:99456]

About this transcript

This transcript has 1 exon, is annotated with 4 domains and features, is associated with 23 variations and maps to 23 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Mc1r-001ENSMUST000000983243638315aaENSMUSP00000095929
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS22756A0A0B6VTJ4 Q01727 NM_008559
NP_032585
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 1 Coding exons: 1 Transcript length: 3,638 bps Translation length: 315 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22756

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01727

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENSMUST00000098324.3

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays