Mouse (GRCm39)
Description

Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:MGI Symbol;Acc:MGI:1298392]

Gene Synonyms

Gng3lg, seipin

Location
About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 846 variant alleles and maps to 233 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000171649.8Bscl2-2101962443aaENSMUSP00000127685.2
 
Protein coding
CCDS29551A0A0R4J225 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENSMUST00000160556.8Bscl2-2061795383aaENSMUSP00000123976.2
 
Protein coding
CCDS70931Q9Z2E9 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000159634.8Bscl2-2031684383aaENSMUSP00000125422.2
 
Protein coding
CCDS70931Q9Z2E9 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000086058.13Bscl2-2011388383aaENSMUSP00000083224.7
 
Protein coding
CCDS70931Q9Z2E9 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000160897.8Bscl2-2071646213aaENSMUSP00000125250.2
 
Nonsense mediated decay
E0CXJ2 TSL:5
ENSMUST00000159653.2Bscl2-204685134aaENSMUSP00000123920.2
 
Nonsense mediated decay
F6US45 TSL:3CDS 5' incomplete
ENSMUST00000159770.2Bscl2-205846No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000162580.8Bscl2-2093495No protein-
 
Retained intron
-TSL:2
ENSMUST00000159571.8Bscl2-2022806No protein-
 
Retained intron
-TSL:2
ENSMUST00000162071.8Bscl2-2081911No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 12, Coding exons: 10, Transcript length: 1,684 bps, Translation length: 383 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Z2E9

CCDS

This transcript is a member of the Mouse CCDS set: CCDS70931

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000159634.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.