Mouse (GRCm39)
Description

high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]

Gene Synonyms

DEF, HMG-1, Hmg1, SBP-1, amphoterin, p30

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 742 variant alleles and maps to 432 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000085546.13Hmgb1-2012838215aaENSMUSP00000082682.7
 
Protein coding
CCDS19883P63158 Q58EV5 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000110505.8Hmgb1-2031720215aaENSMUSP00000106132.2
 
Protein coding
CCDS19883P63158 Q58EV5 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000093196.11Hmgb1-2021092215aaENSMUSP00000106131.2
 
Protein coding
CCDS19883P63158 Q58EV5 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000139443.8Hmgb1-208923171aaENSMUSP00000144129.2
 
Protein coding
A0A0J9YUD8 GENCODE basicTSL:2
ENSMUST00000202133.4Hmgb1-210685211aaENSMUSP00000144412.2
 
Protein coding
A0A0J9YUZ4 TSL:3CDS 3' incomplete
ENSMUST00000125605.2Hmgb1-20560492aaENSMUSP00000114515.2
 
Protein coding
D3YVC6 TSL:5CDS 3' incomplete
ENSMUST00000138553.8Hmgb1-207428124aaENSMUSP00000118733.2
 
Protein coding
D3YZ18 TSL:2CDS 3' incomplete
ENSMUST00000155086.2Hmgb1-209902No protein-
 
Retained intron
-TSL:2
ENSMUST00000133667.2Hmgb1-206654No protein-
 
Retained intron
-TSL:2
ENSMUST00000123645.2Hmgb1-204461No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 4, Coding exons: 2, Transcript length: 604 bps, Translation length: 92 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 3' incomplete

Version

ENSMUST00000125605.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.