Mouse (GRCm39)
Description

high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]

Gene Synonyms

DEF, HMG-1, Hmg1, SBP-1, amphoterin, p30

About this transcript

This transcript has 5 exons, is annotated with 33 domains and features, is associated with 977 variant alleles and maps to 878 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000085546.13Hmgb1-2012838215aaENSMUSP00000082682.7
 
Protein coding
CCDS19883P63158 Q58EV5 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000110505.8Hmgb1-2031720215aaENSMUSP00000106132.2
 
Protein coding
CCDS19883P63158 Q58EV5 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000093196.11Hmgb1-2021092215aaENSMUSP00000106131.2
 
Protein coding
CCDS19883P63158 Q58EV5 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000139443.8Hmgb1-208923171aaENSMUSP00000144129.2
 
Protein coding
A0A0J9YUD8 GENCODE basicTSL:2
ENSMUST00000202133.4Hmgb1-210685211aaENSMUSP00000144412.2
 
Protein coding
A0A0J9YUZ4 TSL:3CDS 3' incomplete
ENSMUST00000125605.2Hmgb1-20560492aaENSMUSP00000114515.2
 
Protein coding
D3YVC6 TSL:5CDS 3' incomplete
ENSMUST00000138553.8Hmgb1-207428124aaENSMUSP00000118733.2
 
Protein coding
D3YZ18 TSL:2CDS 3' incomplete
ENSMUST00000155086.2Hmgb1-209902No protein-
 
Retained intron
-TSL:2
ENSMUST00000133667.2Hmgb1-206654No protein-
 
Retained intron
-TSL:2
ENSMUST00000123645.2Hmgb1-204461No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,838 bps, Translation length: 215 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P63158

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19883

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000085546.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.