Mouse (GRCm39)
Description

septin 9 [Source:MGI Symbol;Acc:MGI:1858222]

Gene Synonyms

MSF1, Msf, PNUTL4, SL3-3 integration site 1, Sept9, Sint1

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 2472 variant alleles and maps to 232 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000093907.11Septin9-2023616583aaENSMUSP00000091435.5
 
Protein coding
CCDS48990Q80UG5 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000106354.9Septin9-2053869565aaENSMUSP00000101961.3
 
Protein coding
A2A6U3 GENCODE basicTSL:5
ENSMUST00000019038.15Septin9-2013784576aaENSMUSP00000019038.9
 
Protein coding
CCDS48991Q80UG5-3 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000106349.2Septin9-2042932334aaENSMUSP00000101956.2
 
Protein coding
CCDS25684Q80UG5-2 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000100193.8Septin9-2032924334aaENSMUSP00000097767.2
 
Protein coding
CCDS25684Q80UG5-2 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000127383.8Septin9-206778242aaENSMUSP00000120065.2
 
Protein coding
A2A6U5 TSL:5CDS 3' incomplete
ENSMUST00000153668.8Septin9-20937474aaENSMUSP00000120382.2
 
Protein coding
A8Y5D3 TSL:2CDS 3' incomplete
ENSMUST00000155331.8Septin9-2104863No protein-
 
Retained intron
-TSL:2
ENSMUST00000134852.2Septin9-208647No protein-
 
Retained intron
-TSL:3
ENSMUST00000129387.2Septin9-207555No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,924 bps, Translation length: 334 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80UG5

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25684

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000100193.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.