Description

lysine (K)-specific demethylase 3A [Source:MGI Symbol;Acc:MGI:98847]

Location
About this transcript

This transcript has 27 exons, is annotated with 8 domains and features, is associated with 17 variations and maps to 46 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Kdm3a-202ENSMUST0000016722048531323aaENSMUSP00000128789
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS20233Q6PCM1 NM_173001
NP_766589
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Kdm3a-201ENSMUST0000006550948141323aaENSMUSP00000065716
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS20233Q6PCM1 NM_001038695
NP_001033784
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 27 Coding exons: 25 Transcript length: 4,814 bps Translation length: 1,323 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20233

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PCM1

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000065509.7

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays