Transcript: ENSMUST00000054477.8 AI837181-201

Description

expressed sequence AI837181 [Source:MGI Symbol;Acc:MGI:2147598]

Location

Chromosome 19: 5,475,185-5,477,341 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 495 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000047423.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000159759.3	AI837181-202	1528	298aa	ENSMUSP00000125651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29463	Q8VD62	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000054477.8	AI837181-201	1529	181aa	ENSMUSP00000158508.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8VD62-1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,529 bps, Translation length: 181 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VD62

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000054477.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000054477.8 AI837181-201

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Transcript: ENSMUST00000054477.8 AI837181-201

Summary

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