Transcript: ENSMUST00000058845.9 Basp1-201

Description

brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]

Gene Synonyms

2610024P12Rik, CAP-23, CAP23, Ckap3

Location

Chromosome 15: 25,363,363-25,413,850 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 3594 variant alleles and maps to 319 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000045763.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000058845.9	Basp1-201	1855	226aa	ENSMUSP00000053943.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27398	Q91XV3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000228597.2	Basp1-202	363	17aa	ENSMUSP00000154675.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BRZ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,855 bps, Translation length: 226 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91XV3

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27398

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000058845.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000058845.9 Basp1-201

Summary

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Transcript: ENSMUST00000058845.9 Basp1-201

Summary

About Us

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