Description

ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:MGI Symbol;Acc:MGI:97569]

Location
About this transcript

This transcript has 28 exons, is annotated with 36 domains and features, is associated with 59 variations and maps to 41 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Abcb4-001ENSMUST0000000371740791276aaENSMUSP00000003717
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19086P21440 NM_008830
NP_032856
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Abcb4-004ENSMUST000001960672791882aaENSMUSP00000142425
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Abcb4-003ENSMUST000001999543319No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Abcb4-002ENSMUST000001974581979No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Abcb4-005ENSMUST00000197150680No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 28 Coding exons: 27 Transcript length: 4,079 bps Translation length: 1,276 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19086

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21440

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000003717.9

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays