Description

breast cancer 2 [Source:MGI Symbol;Acc:MGI:109337]

About this transcript

This transcript has 27 exons, is annotated with 39 domains and features, is associated with 153 variations and maps to 54 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Brca2-201ENSMUST00000044620107243329aaENSMUSP00000038576
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39411P97929 NM_001081001
NM_009765
NP_001074470
NP_033895
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 27 Coding exons: 26 Transcript length: 10,724 bps Translation length: 3,329 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39411

Uniprot

This transcript corresponds to the following Uniprot identifiers: P97929

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENSMUST00000044620.7

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays