Description

interleukin 18 [Source:MGI Symbol;Acc:MGI:107936]

Location
About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 7 variations and maps to 16 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Il18-202ENSMUST00000180021702192aaENSMUSP00000137193
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS40622P70380 Q2PMY2 NM_008360
NP_032386
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Il18-201ENSMUST00000059081702192aaENSMUSP00000054591
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K3W4N2 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 5 Coding exons: 5 Transcript length: 702 bps Translation length: 192 residues

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENSMUST00000059081.9

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays