Description

secretoglobin, family 3A, member 2 [Source:MGI Symbol;Acc:MGI:2153470]

Location
About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 11 variations and maps to 17 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Scgb3a2-002ENSMUST00000043803842139aaENSMUSP00000038872
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q920H1 NM_054038
NP_473379
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Scgb3a2-003ENSMUST00000189750578113aaENSMUSP00000140375
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q920H1 NM_001289643
NP_001276572
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Scgb3a2-001ENSMUST0000018715755091aaENSMUSP00000140476
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5D060 Q920H1 NM_001289644
NP_001276573
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 2 Coding exons: 2 Transcript length: 842 bps Translation length: 139 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q920H1

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000043803.8

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays