Mouse (GRCm39)
Description

retinoic acid receptor, alpha [Source:MGI Symbol;Acc:MGI:97856]

Gene Synonyms

RAR alpha 1, RARalpha1

Location
About this transcript

This transcript has 9 exons, is annotated with 42 domains and features, is associated with 2739 variant alleles and maps to 245 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000068133.10Rara-2013384462aaENSMUSP00000069744.4
 
Protein coding
CCDS36304P11416 Q3U3R3 Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENSMUST00000107473.3Rara-2023238459aaENSMUSP00000103097.3
 
Protein coding
CCDS48905P11416-2 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000164748.8Rara-2073129462aaENSMUSP00000129791.2
 
Protein coding
CCDS36304P11416 Q3U3R3 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000107475.9Rara-2042469462aaENSMUSP00000103099.3
 
Protein coding
CCDS36304P11416 Q3U3R3 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000107474.8Rara-2032380462aaENSMUSP00000103098.2
 
Protein coding
CCDS36304P11416 Q3U3R3 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000139399.2Rara-205356No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000147985.2Rara-206307No protein-
 
Protein coding CDS not defined
-TSL:3
Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,380 bps, Translation length: 462 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11416

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36304

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000107474.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.