Description

group specific component [Source:MGI Symbol;Acc:MGI:95669]

Location
About this transcript

This transcript has 13 exons, is associated with 31 variations and maps to 29 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Gc-001ENSMUST000000492091801476aaENSMUSP00000046636
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19407P21614 NM_008096
NP_032122
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gc-002ENSMUST00000200534444125aaENSMUSP00000143624
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Statistics

Exons: 13 Coding exons: 12 Transcript length: 1,801 bps Translation length: 476 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19407

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21614

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000049209.9

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays