Description

prostaglandin-endoperoxide synthase 2 [Source:MGI Symbol;Acc:MGI:97798]

About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 9 variations and maps to 13 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ptgs2-001ENSMUST000000350654453604aaENSMUSP00000035065
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15353Q05769 NM_011198
NP_035328
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Ptgs2-003ENSMUST0000019078435862aaENSMUSP00000139904
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 10 Coding exons: 10 Transcript length: 4,453 bps Translation length: 604 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS15353

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q05769

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000035065.8

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays