Transcript: ENSMUST00000033957.12 Adam18-201

Description

a disintegrin and metallopeptidase domain 18 [Source:MGI Symbol;Acc:MGI:105986]

Gene Synonyms

Adam27, Dtgn3

Location

Chromosome 8: 25,092,262-25,164,771 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 18 domains and features, is associated with 4774 variant alleles and maps to 220 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000031552.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000033957.12	Adam18-201	2361	719aa	ENSMUSP00000033957.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22195	Q9R157	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000138232.2	Adam18-202	301	66aa	ENSMUSP00000148259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1B0GT98	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000173833.3	Adam18-203	2181	634aa	ENSMUSP00000133378.2	Nonsense mediated decay		G3UWP9	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,361 bps, Translation length: 719 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9R157

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22195

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000033957.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000033957.12 Adam18-201

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Transcript: ENSMUST00000033957.12 Adam18-201

Summary

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