Description

spinster homolog 1 [Source:MGI Symbol;Acc:MGI:1920908]

Gene

This transcript is a product of gene ENSMUSG00000030741

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Spns1-001ENSMUST000000329942219 bp528 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21826D3YWU4 Q8R0G7 NM_023712
NP_076201
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Spns1-003ENSMUST000001198462017 bp476 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTR6 D3YWU4 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Spns1-005ENSMUST000001197542001 bp453 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YWA9 D3YWU4 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Spns1-006ENSMUST00000150476867 bp239 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YWU4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Spns1-004ENSMUST000001381412152 bp165 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6REG2 -
Spns1-002ENSMUST000001268103251 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Spns1-008ENSMUST00000137263821 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Spns1-007ENSMUST00000150748619 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Spns1-009ENSMUST00000152000435 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 12 Coding exons: 12 Transcript length: 2,219 bps Translation length: 528 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21826

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8R0G7

Ensembl version

ENSMUST00000032994.9

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays