Description

pancreatic and duodenal homeobox 1 [Source:MGI Symbol;Acc:MGI:102851]

Gene

This transcript is a product of gene ENSMUSG00000029644

This gene has 1 transcript (splice variant) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Pdx1-001ENSMUST000000855914318284 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39398P52946 Q6LEB3 NM_008814
NP_032840
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 2 Coding exons: 2 Transcript length: 4,318 bps Translation length: 284 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39398

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52946

Transcript Support Level

1

Ensembl version

ENSMUST00000085591.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays