Description

ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 [Source:MGI Symbol;Acc:MGI:88110]

About this transcript

This transcript has 20 exons, is annotated with 33 domains and features, is associated with 28 variations and maps to 40 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Atp2a2-201ENSMUST0000003142344911044aaENSMUSP00000031423
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57378O55143 Q5DTI2 NM_001110140
NP_001103610
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
Atp2a2-202ENSMUST000001779744314998aaENSMUSP00000136104
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57379O55143 NM_009722
NP_033852
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1APPRIS candidate principal isoform that is conserved in at least three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Atp2a2-203ENSMUST000001799393534998aaENSMUSP00000135935
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KMM5 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 20 Coding exons: 20 Transcript length: 4,491 bps Translation length: 1,044 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57378

Uniprot

This transcript corresponds to the following Uniprot identifiers: O55143

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000031423.8

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays