Mouse (GRCm39)
Description

sorting nexin 17 [Source:MGI Symbol;Acc:MGI:2387801]

Gene Synonyms

5830447M19Rik, D5Ertd260e, b2b1625.1Clo

Location
About this transcript

This transcript has 16 exons, is annotated with 1 domain and feature, is associated with 730 variant alleles and maps to 266 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000031029.15Snx17-2012018470aaENSMUSP00000031029.9
 
Protein coding
CCDS19177Q8BVL3 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000201535.4Snx17-204765169aaENSMUSP00000144643.2
 
Protein coding
D3Z7S9 TSL:3CDS 3' incomplete
ENSMUST00000201679.4Snx17-20536267aaENSMUSP00000144688.2
 
Protein coding
D3Z3J1 TSL:5CDS 3' incomplete
ENSMUST00000200730.4Snx17-202201987aaENSMUSP00000144504.2
 
Nonsense mediated decay
H3BKG9 TSL:5
ENSMUST00000202124.4Snx17-208164766aaENSMUSP00000144168.2
 
Nonsense mediated decay
H3BKQ6 TSL:5
ENSMUST00000201343.2Snx17-203764No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000202323.4Snx17-2102332No protein-
 
Retained intron
-TSL:1
ENSMUST00000202032.4Snx17-2072111No protein-
 
Retained intron
-TSL:5
ENSMUST00000201835.4Snx17-206786No protein-
 
Retained intron
-TSL:3
ENSMUST00000202743.4Snx17-211731No protein-
 
Retained intron
-TSL:3
ENSMUST00000202318.4Snx17-209641No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 16, Coding exons: 4, Transcript length: 2,019 bps, Translation length: 87 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000200730.4

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.