Description

solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:MGI Symbol;Acc:MGI:95760]

Gene

This transcript is a product of gene ENSMUSG00000028542

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Slc6a9-001ENSMUST000000302693479 bp633 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18538E9Q036 E9Q517 P28571
NM_008135
NP_032161
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Slc6a9-003ENSMUST000000638573146 bp633 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18538E9Q036 E9Q517 P28571
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Slc6a9-010ENSMUST000001632882107 bp637 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q036 E9Q3V0 E9Q517
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Slc6a9-009ENSMUST000001698851876 bp521 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q517 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Slc6a9-013ENSMUST000001699901344 bp373 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q036 E9Q3Z2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Slc6a9-006ENSMUST000001320431194 bp321 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q036 E9QA02 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Slc6a9-011ENSMUST00000123994456 bp116 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q036 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Slc6a9-004ENSMUST00000151316244 bp1 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Slc6a9-002ENSMUST000001491682834 bp126 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PWC4 -
Slc6a9-008ENSMUST00000136476488 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Slc6a9-007ENSMUST00000135769370 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Slc6a9-012ENSMUST00000170733678 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 14 Coding exons: 13 Transcript length: 3,479 bps Translation length: 633 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS18538

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28571

Ensembl version

ENSMUST00000030269.8

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays