Mouse (GRCm39)
Description

parkin RBR E3 ubiquitin protein ligase [Source:MGI Symbol;Acc:MGI:1355296]

Gene Synonyms

PRKN, Park2, Parkin

Location
About this transcript

This transcript has 12 exons, is annotated with 36 domains and features, is associated with 56010 variant alleles and maps to 337 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000191124.7Prkn-2083202464aaENSMUSP00000140587.2
 
Protein coding
CCDS79506Q9WVS6 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000233706.2Prkn-2141272274aaENSMUSP00000156810.2
 
Protein coding
A0A3B2W489 GENCODE basic
ENSMUST00000179624.8Prkn-203110871aaENSMUSP00000136268.2
 
Protein coding
J3QMF8 GENCODE basicTSL:5
ENSMUST00000218435.2Prkn-209865288aaENSMUSP00000151830.2
 
Protein coding
A0A1W2P7W2 GENCODE basicTSL:5
ENSMUST00000186406.2Prkn-205607104aaENSMUSP00000140217.2
 
Protein coding
A0A087WQJ2 TSL:3CDS 5' incomplete
ENSMUST00000233294.2Prkn-2101377214aaENSMUSP00000156589.2
 
Nonsense mediated decay
B8YP90 -
ENSMUST00000233634.2Prkn-2131252106aaENSMUSP00000156481.2
 
Nonsense mediated decay
B8YP89 -
ENSMUST00000233436.2Prkn-21293065aaENSMUSP00000156432.2
 
Nonsense mediated decay
B8YP88 -
ENSMUST00000233411.2Prkn-21179363aaENSMUSP00000156556.2
 
Nonsense mediated decay
D3JSV6 -
ENSMUST00000233782.2Prkn-21543459aaENSMUSP00000156534.2
 
Nonsense mediated decay
A0A3B2W3P9 -
ENSMUST00000097413.5Prkn-2024759No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000190894.2Prkn-2072182No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000186167.2Prkn-2041420No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000190849.2Prkn-2061200No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000066658.13Prkn-2011153No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,202 bps, Translation length: 464 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WVS6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS79506

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000191124.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.