Description

general transcription factor II I repeat domain-containing 1 [Source:MGI Symbol;Acc:MGI:1861942]

About this transcript

This transcript has 30 exons, is annotated with 29 domains and features, is associated with 30 variations and maps to 11 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Gtf2ird1-002ENSMUST0000010065236931104aaENSMUSP00000098217
 
Protein coding
CCDS39307Q9JI57 NM_001081462
NP_001074931
TSL:1GENCODE basicAPPRIS P4
Gtf2ird1-013ENSMUST0000007316135721072aaENSMUSP00000072904
 
Protein coding
CCDS39305Q9JI57 NM_020331
NP_065064
TSL:1GENCODE basicAPPRIS ALT2
Gtf2ird1-001ENSMUST0000017179435241045aaENSMUSP00000129392
 
Protein coding
CCDS39304Q6PD35 NM_001081464
NP_001074933
TSL:1GENCODE basicAPPRIS ALT2
Gtf2ird1-006ENSMUST0000010065034871077aaENSMUSP00000098215
 
Protein coding
CCDS39306Q9JI57 NM_001081463
NP_001074932
TSL:1GENCODE basicAPPRIS ALT2
Gtf2ird1-009ENSMUST0000011124434611045aaENSMUSP00000106875
 
Protein coding
CCDS39304Q6PD35 NM_001081465
NP_001074934
TSL:1GENCODE basicAPPRIS ALT2
Gtf2ird1-012ENSMUST0000007411433301001aaENSMUSP00000073752
 
Protein coding
CCDS51657Q9JI57 NM_001081467
NM_001244936
NP_001074936
NP_001231865
TSL:1GENCODE basic
Gtf2ird1-004ENSMUST0000011124532991026aaENSMUSP00000106876
 
Protein coding
CCDS39302Q9JI57 NM_001081466
NP_001074935
TSL:1GENCODE basicAPPRIS ALT2
Gtf2ird1-007ENSMUST000001006543156974aaENSMUSP00000098219
 
Protein coding
CCDS39303Q9JI57 NM_001081468
NP_001074937
TSL:1GENCODE basic
Gtf2ird1-005ENSMUST0000020255435141058aaENSMUSP00000143809
 
Protein coding
---GENCODE basicAPPRIS ALT2
Gtf2ird1-201ENSMUST000001670843283969aaENSMUSP00000132882
 
Protein coding
-Q9JI57 -TSL:1GENCODE basic
Gtf2ird1-011ENSMUST000002009443133969aaENSMUSP00000143848
 
Protein coding
--NM_001081469
NM_001081470
NP_001074938
NP_001074939
GENCODE basic
Gtf2ird1-010ENSMUST000002022803052942aaENSMUSP00000143897
 
Protein coding
---GENCODE basic
Gtf2ird1-014ENSMUST000002028291080345aaENSMUSP00000144604
 
Protein coding
-Q80ZG9 -CDS 5' incomplete
Gtf2ird1-021ENSMUST00000201441786262aaENSMUSP00000144447
 
Protein coding
---CDS 5' and 3' incomplete
Gtf2ird1-017ENSMUST00000201704751251aaENSMUSP00000144373
 
Protein coding
---CDS 5' and 3' incomplete
Gtf2ird1-029ENSMUST00000202104676167aaENSMUSP00000144203
 
Protein coding
---CDS 5' incomplete
Gtf2ird1-022ENSMUST00000201447579193aaENSMUSP00000144222
 
Protein coding
---CDS 5' and 3' incomplete
Gtf2ird1-025ENSMUST00000202165579193aaENSMUSP00000144420
 
Protein coding
---CDS 5' and 3' incomplete
Gtf2ird1-016ENSMUST0000020164736199aaENSMUSP00000144391
 
Protein coding
---CDS 3' incomplete
Gtf2ird1-026ENSMUST00000202321143947aaENSMUSP00000143948
 
Nonsense mediated decay
---CDS 5' incomplete
Gtf2ird1-019ENSMUST0000020079885774aaENSMUSP00000144521
 
Nonsense mediated decay
---CDS 5' incomplete
Gtf2ird1-024ENSMUST0000020149580138aaENSMUSP00000144003
 
Nonsense mediated decay
---CDS 5' incomplete
Gtf2ird1-020ENSMUST0000020152660466aaENSMUSP00000144502
 
Nonsense mediated decay
---CDS 5' incomplete
Gtf2ird1-015ENSMUST00000202763608No protein-
 
Processed transcript
---
Gtf2ird1-008ENSMUST000002023353068No protein-
 
Retained intron
---
Gtf2ird1-003ENSMUST000002024142506No protein-
 
Retained intron
---
Gtf2ird1-018ENSMUST00000202202810No protein-
 
Retained intron
---
Gtf2ird1-027ENSMUST00000200817802No protein-
 
Retained intron
---
Gtf2ird1-023ENSMUST00000202334741No protein-
 
Retained intron
---
Gtf2ird1-028ENSMUST00000202268630No protein-
 
Retained intron
---
Gtf2ird1-030ENSMUST00000201608288No protein-
 
Retained intron
---
Statistics

Exons: 30 Coding exons: 29 Transcript length: 3,693 bps Translation length: 1,104 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39307

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JI57

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000100652.7

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays