Mouse (GRCm39)
Description

patched 1 [Source:MGI Symbol;Acc:MGI:105373]

Gene Synonyms

A230106A15Rik, Patched 1, Ptc, Ptc1, wig

Location
About this transcript

This transcript has 24 exons, is annotated with 1 domain and feature, is associated with 3165 variant alleles and maps to 426 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000021921.11Ptch1-20177251434aaENSMUSP00000021921.6
 
Protein coding
CCDS26592Q61115 Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000192155.6Ptch1-20270021297aaENSMUSP00000141489.2
 
Protein coding
A0A0A6YWC4 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000195106.2Ptch1-2051123326aaENSMUSP00000141298.2
 
Protein coding
A0A0A6YVW7 TSL:5CDS 3' incomplete
ENSMUST00000193953.6Ptch1-203849174aaENSMUSP00000142036.2
 
Protein coding
Q5R1U4 TSL:1CDS 3' incomplete
ENSMUST00000195756.6Ptch1-207809174aaENSMUSP00000141990.2
 
Protein coding
Q5R1U4 TSL:1CDS 3' incomplete
ENSMUST00000195258.7Ptch1-20610383456aaENSMUSP00000141309.3
 
Nonsense mediated decay
A0A0A6YVX7 TSL:5CDS 5' incomplete
ENSMUST00000194663.6Ptch1-2047657581aaENSMUSP00000141766.2
 
Nonsense mediated decay
A0A0A6YWZ4 TSL:2
ENSMUST00000222040.2Ptch1-209539No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000223515.2Ptch1-2102216No protein-
 
Retained intron
-TSL:NA
ENSMUST00000220588.2Ptch1-208349No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 24, Coding exons: 15, Transcript length: 7,657 bps, Translation length: 581 residues

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000194663.6

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.