Mouse (GRCm39)
Description

hypoxia inducible factor 1, alpha subunit [Source:MGI Symbol;Acc:MGI:106918]

Gene Synonyms

HIF-1alpha, HIF1alpha, MOP1, bHLHe78

Location
About this transcript

This transcript has 15 exons, is annotated with 40 domains and features, is associated with 1847 variant alleles and maps to 383 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000021530.8Hif1a-2014724836aaENSMUSP00000021530.8
 
Protein coding
CCDS25977Q61221 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENSMUST00000110461.8Hif1a-2024385810aaENSMUSP00000106088.2
 
Protein coding
CCDS83968A0A0R4J1E9 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000110464.8Hif1a-2031759258aaENSMUSP00000106091.2
 
Protein coding
A0A0R4J1F0 GENCODE basicTSL:1
ENSMUST00000157041.2Hif1a-205484No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000149740.2Hif1a-204693No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 15, Coding exons: 15, Transcript length: 4,724 bps, Translation length: 836 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61221

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25977

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000021530.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.